BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C04LP1|AL429029
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 502 e-142
>3x_Contig1362
Length = 8864
Score = 502 bits (253), Expect = e-142
Identities = 409/461 (88%)
Strand = Plus / Minus
Query: 439 atctgtcgtaaccggtacgatgctacttgcccctcctgtgattaccctggtagcggatgt 498
||||||||| |||||||| ||||||||||||| |||||| |||||||||| ||||||||
Sbjct: 8833 atctgtcgttaccggtactatgctacttgccctccctgtgtttaccctggttgcggatgt 8774
Query: 499 ccaattgtgttaggattatgcaatcataatttccatgttcattgtatcaagcaatggcta 558
| | | | |||||||| | || || |||| | ||| ||| ||| || ||| |||||
Sbjct: 8773 ctattggctgtaggattaggtaagcagaattcctatggtcaggttattaatcaagggcta 8714
Query: 559 agtactgaaacatcaaaagggttgtgtcccttgtgtagacaaggattccagttgaggcct 618
|||| | ||||||||||| |||||||||||||||| ||||||||||| || |||||||
Sbjct: 8713 tgtacggttacatcaaaaggtttgtgtcccttgtgtatacaaggattcctgtggaggcct 8654
Query: 619 aacgttctgataaataagatgcaccatgatgagttccagaaactgttgatgagtgtgaga 678
| ||| ||||||||||| |||||| || | |||||||| | ||||||||||| |||
Sbjct: 8653 atttttcggataaataagaagcaccaggaggtgttccagatattgttgatgagttctaga 8594
Query: 679 cagcacaacattccgatgggtggtggtgaaatagatcaagatgtgatggatgatggcttc 738
|||||| |||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8593 tagcacatcattcctttgtttggtggtgaaatagatcaagatgtgatggatgatggcttc 8534
Query: 739 atacgatgaagggaagactcgatatgctgaagatatgtgtgtgtacatctatttaattgg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8533 atacgatgaagggaagactcgatatgctgaagatatgtgtgtgtacatctatttaattgg 8474
Query: 799 taataggatagagtagtggttcaaatcatcagtgatgggctaagtatactaggtagcgag 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8473 taataggatagagtagtggttcaaatcatcagtgatgggctaagtatactaggtagcgag 8414
Query: 859 gccatattacaggtggtgtctcttgctcacatgagacaaaa 899
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 8413 gccatattacaggtggtgtctcttgctcacatgagacaaaa 8373
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6821
Number of Sequences: 1807
Number of extensions: 6821
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)